updated TODO and Makefile

Makefile

@@ -9,8 +9,8 @@ GPUARCH      ?= sm_75
 CUDAHOME     ?= /usr/local/cuda
 MPIHOME      ?= /home/meiron/local
 OPTIMIZATION ?= 3
-CFLAGS        = -mcmodel=large
-CXXFLAGS      = $(CFLAGS)
+CFLAGS       += -mcmodel=large
+CXXFLAGS     += $(CFLAGS)
 CUDAFLAGS     =
 
 CXX          ?= g++

TODO.md

@@ -1,4 +1,16 @@
 TODO file
 =========
 
+* Bug at the dumping of coefficients (all nodes dump only at the first instance)
+
 * Since the jerk calculate from the SCF is zero initially, the zeroth timestep for each particle is calculated through a particular if-clause in phiGRAPE and the result is that it is quite large (at least in the purely collisionless case).
+
+* Fix CEP so it doesn't need a preprocessor definition.
+
+* Read DTSCF from a file or something.
+
+* Memory_buffer class to use pinned memory. Also add a proper destructor.
+
+* Add a print statement with the content summary of the grapite.mask file.
+
+* Make it so that very hard binaries merge if there is zero softening.